afq matlab analysis pipeline Search Results


afq matlab tractometry pipeline  (MathWorks Inc)
90
MathWorks Inc afq matlab tractometry pipeline
Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and <t>MATLAB</t> code are available at <t>https://github.com/YeatmanLab/AFQ-Browser_data</t> (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )
Afq Matlab Tractometry Pipeline, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/afq matlab tractometry pipeline/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
afq matlab tractometry pipeline - by Bioz Stars, 2026-04
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afq matlab analysis pipeline  (MathWorks Inc)
90
MathWorks Inc afq matlab analysis pipeline
Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and <t>MATLAB</t> code are available at <t>https://github.com/YeatmanLab/AFQ-Browser_data</t> (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )
Afq Matlab Analysis Pipeline, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/afq matlab analysis pipeline/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
afq matlab analysis pipeline - by Bioz Stars, 2026-04
90/100 stars
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automated fiber quantification pipeline afq  (MathWorks Inc)
90
MathWorks Inc automated fiber quantification pipeline afq
Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and <t>MATLAB</t> code are available at <t>https://github.com/YeatmanLab/AFQ-Browser_data</t> (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )
Automated Fiber Quantification Pipeline Afq, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automated fiber quantification pipeline afq/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
automated fiber quantification pipeline afq - by Bioz Stars, 2026-04
90/100 stars
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matlab r2019b  (MathWorks Inc)
90
MathWorks Inc matlab r2019b
Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and <t>MATLAB</t> code are available at <t>https://github.com/YeatmanLab/AFQ-Browser_data</t> (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )
Matlab R2019b, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab r2019b/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab r2019b - by Bioz Stars, 2026-04
90/100 stars
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matlab .mat/hdf5 file  (MathWorks Inc)
90
MathWorks Inc matlab .mat/hdf5 file
Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and <t>MATLAB</t> code are available at <t>https://github.com/YeatmanLab/AFQ-Browser_data</t> (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )
Matlab .Mat/Hdf5 File, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab .mat/hdf5 file/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab .mat/hdf5 file - by Bioz Stars, 2026-04
90/100 stars
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version r2015b  (MathWorks Inc)
90
MathWorks Inc version r2015b
Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and <t>MATLAB</t> code are available at <t>https://github.com/YeatmanLab/AFQ-Browser_data</t> (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )
Version R2015b, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/version r2015b/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
version r2015b - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
automated fiber quantification pipeline  (MathWorks Inc)
90
MathWorks Inc automated fiber quantification pipeline
Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and <t>MATLAB</t> code are available at <t>https://github.com/YeatmanLab/AFQ-Browser_data</t> (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )
Automated Fiber Quantification Pipeline, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automated fiber quantification pipeline/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
automated fiber quantification pipeline - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
matlab r2020b  (MathWorks Inc)
90
MathWorks Inc matlab r2020b
Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and <t>MATLAB</t> code are available at <t>https://github.com/YeatmanLab/AFQ-Browser_data</t> (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )
Matlab R2020b, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab r2020b/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab r2020b - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
automated fiber quantification (afq)  (MathWorks Inc)
90
MathWorks Inc automated fiber quantification (afq)
Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and <t>MATLAB</t> code are available at <t>https://github.com/YeatmanLab/AFQ-Browser_data</t> (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )
Automated Fiber Quantification (Afq), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automated fiber quantification (afq)/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
automated fiber quantification (afq) - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

Image Search Results


Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and MATLAB code are available at https://github.com/YeatmanLab/AFQ-Browser_data (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )

Journal: Nature Communications

Article Title: A browser-based tool for visualization and analysis of diffusion MRI data

doi: 10.1038/s41467-018-03297-7

Figure Lengend Snippet: Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and MATLAB code are available at https://github.com/YeatmanLab/AFQ-Browser_data (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )

Article Snippet: AFQ-Browser takes the output of the AFQ MATLAB tractometry pipeline, and generates a browser-based visualization of the results.

Techniques:

Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and MATLAB code are available at https://github.com/YeatmanLab/AFQ-Browser_data (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )

Journal: Nature Communications

Article Title: A browser-based tool for visualization and analysis of diffusion MRI data

doi: 10.1038/s41467-018-03297-7

Figure Lengend Snippet: Development of the corticospinal tract, arcuate fasciculus, and cingulum. Tract profiles of mean diffusivity (top) and fractional anisotropy (bottom) are shown for the left hemisphere corticospinal tract (CST, orange), arcuate fasciculus (blue), and cingulum (green). Splitting the group by age, and selecting 3 bins, displays mean lines of three groups: 8–15 (red), 15–30 (purple), and 30–50 (blue). For the CST, there is a region that shows a decrease in FA with development, and this location of the tract is highlighted on the plot using the “brushable tracts” feature (shaded gray box). The linked view in the anatomy displays the portion of the CST that is brushed in the plot demonstrating that this effect occurs in the anatomical portion of the CST known as the centrum semiovale, adjacent to the arcuate fasciculus. This linked visualization provides a connection between the data plots and the 3D Anatomy. Data and MATLAB code are available at https://github.com/YeatmanLab/AFQ-Browser_data (see Figure2_Development.m) and running AFQ-Browser instance at: https://YeatmanLab.github.io/AFQBrowser-demo/ )

Article Snippet: The AFQ MATLAB analysis pipeline produces a standard AFQ object, stored as a MATLAB .mat/hdf5 file.

Techniques: